all paralogous pre-mir class in Tribolium castaneum species.
Index ID Class Mature
miRNA
(MatMiR)		 Match/
MatMiR Length		 Chrom Strand MatMiR
Position		 PreMir
Position		 Confidence Evo_
Source		 Species_
No		 Distribution
1 triCas2-3 mir-1000 ame-miR-1000 20/21 ChLG1X + 15-35 N/A 0.999928 Paralog 4/6 2/9
2 triCas2-4 mir-iab-4 dme-miR-iab-4as-5p 23/23 ChLG2 + 13-35 N/A 0.999898 Paralog 16/16 3/44
3 triCas2-5 mir-10 cap-miR-10a 20/22 ChLG2 + 13-34 N/A 0.9998 Paralog 43/59 2/124
4 triCas2-5 mir-10 spu-miR-10 21/23 ChLG2 + 16-36 N/A 0.999735 Paralog 43/59 2/124
5 triCas2-5 mir-10 lmi-miR-10* 22/22 ChLG2 + 50-71 N/A 0.999904 Paralog 43/59 2/124
6 triCas2-7 mir-970 tca-miR-970 21/21 ChLG2 + 50-70 N/A 0.99934 Paralog 4/4 2/5
7 triCas2-7 mir-970 bmo-miR-970 19/21 ChLG2 + 52-70 N/A 0.998119 Paralog 4/4 2/5
8 triCas2-9 mir-iab-4 tca-miR-iab-4-5p 22/22 ChLG2 - 19-40 N/A 0.999732 Paralog 16/16 3/44
9 triCas2-9 mir-iab-4 tca-miR-iab-4-3p 24/24 ChLG2 - 43-66 N/A 0.998953 Paralog 16/16 3/44
10 triCas2-11 mir-71 cel-miR-71 19/19 ChLG3 + 9-27 N/A 0.987958 Paralog 13/17 2/25
11 triCas2-11 mir-71 spu-miR-71 22/23 ChLG3 + 10-31 N/A 0.993162 Paralog 13/17 2/25
12 triCas2-21 mir-263 ame-miR-263b 21/21 ChLG3 + 10-30 N/A 0.986466 Paralog 16/26 3/53
13 triCas2-11 mir-71 lgi-miR-71 22/23 ChLG3 + 11-33 N/A 0.990701 Paralog 13/17 2/25
14 triCas2-21 mir-263 tca-miR-263b 20/20 ChLG3 + 11-30 N/A 0.992359 Paralog 16/26 3/53
15 triCas2-23 mir-219 odi-miR-219 19/21 ChLG3 + 12-30 N/A 0.999415 Paralog 38/52 2/89
16 triCas2-21 mir-263 bmo-miR-263a 19/21 ChLG3 + 13-31 N/A 0.987145 Paralog 16/26 3/53
17 triCas2-23 mir-219 hsa-miR-219-5p 21/21 ChLG3 + 14-34 N/A 0.999281 Paralog 38/52 2/89
18 triCas2-23 mir-219 dre-miR-219 22/22 ChLG3 + 14-35 N/A 0.999411 Paralog 38/52 2/89
19 triCas2-23 mir-219 spu-miR-219 22/23 ChLG3 + 15-37 N/A 0.999414 Paralog 38/52 2/89
20 triCas2-18 mir-2 tca-miR-2 23/23 ChLG3 + 50-72 N/A 0.999571 Paralog 20/21 6/116
21 triCas2-17 mir-2 tca-miR-2 23/23 ChLG3 + 50-72 N/A 0.997706 Paralog 20/21 6/116
22 triCas2-20 mir-14 tca-miR-14 21/21 ChLG3 + 50-70 N/A 0.938325 Paralog 16/16 2/29
23 triCas2-15 mir-13 ame-miR-13a 20/21 ChLG3 + 50-70 N/A 0.99888 Paralog 17/18 3/75
24 triCas2-14 mir-2 tca-miR-2 23/23 ChLG3 + 50-72 N/A 0.999712 Paralog 20/21 6/116
25 triCas2-15 mir-13 tca-miR-13a 22/22 ChLG3 + 50-71 N/A 0.997945 Paralog 17/18 3/75
26 triCas2-15 mir-13 bmo-miR-13a 19/21 ChLG3 + 52-70 N/A 0.999059 Paralog 17/18 3/75
27 triCas2-26 mir-276 dgr-miR-276b* 23/23 ChLG3 - 13-35 N/A 0.999691 Paralog 17/17 2/53
28 triCas2-26 mir-276 dme-miR-276* 22/23 ChLG3 - 14-35 N/A 0.999397 Paralog 17/17 2/53
29 triCas2-26 mir-276 aga-miR-276-5p 20/20 ChLG3 - 14-33 N/A 0.99982 Paralog 17/17 2/53
30 triCas2-26 mir-276 tca-miR-276* 20/20 ChLG3 - 15-34 N/A 0.99947 Paralog 17/17 2/53
31 triCas2-29 mir-12 cap-miR-12 21/22 ChLG3 - 15-35 N/A 0.997238 Paralog 18/18 2/28
32 triCas2-29 mir-12 bmo-miR-12 22/23 ChLG3 - 16-38 N/A 0.99702 Paralog 18/18 2/28
33 triCas2-31 mir-283 tca-miR-283 20/20 ChLG3 - 20-39 N/A 0.999794 Paralog 16/17 2/23
34 triCas2-28 bantam bmo-bantam 22/23 ChLG3 - 49-71 N/A 0.999267 Paralog 20/22 2/30
35 triCas2-26 mir-276 tca-miR-276 22/22 ChLG3 - 49-70 N/A 0.999789 Paralog 17/17 2/53
36 triCas2-33 mir-981 ame-miR-981 21/22 ChLG4 + 50-71 N/A 0.993939 Paralog 6/13 2/16
37 triCas2-33 mir-981 lgi-miR-981 21/23 ChLG4 + 50-70 N/A 0.989469 Paralog 6/13 2/16
38 triCas2-33 mir-981 aga-miR-981 20/20 ChLG4 + 52-71 N/A 0.994244 Paralog 6/13 2/16
39 triCas2-37 mir-33 dme-miR-33 20/21 ChLG4 - 15-35 N/A 0.987574 Paralog 34/54 2/96
40 triCas2-37 mir-33 tca-miR-33 19/19 ChLG4 - 18-36 N/A 0.990149 Paralog 34/54 2/96
41 triCas2-37 mir-33 hsa-miR-33a 21/21 ChLG4 - 19-39 N/A 0.991918 Paralog 34/54 2/96
42 triCas2-37 mir-33 gga-miR-33 20/20 ChLG4 - 19-38 N/A 0.983554 Paralog 34/54 2/96
43 triCas2-37 mir-33 spu-miR-33 21/22 ChLG4 - 21-42 N/A 0.993511 Paralog 34/54 2/96
44 triCas2-42 mir-965 aga-miR-965 21/22 ChLG5 + 51-72 N/A 0.997995 Paralog 4/6 2/10
45 triCas2-53 mir-932 tca-miR-932 22/22 ChLG5 - 15-36 N/A 0.999585 Paralog 4/13 2/14
46 triCas2-50 mir-31 tca-miR-31a 22/22 ChLG5 - 18-39 N/A 0.990212 Paralog 40/60 2/107
47 triCas2-48 mir-1 cap-miR-1 21/22 ChLG5 - 23-44 N/A 0.801972 Paralog 41/61 2/166
48 triCas2-44 mir-133 spu-miR-133 22/23 ChLG5 - 49-71 N/A 0.997783 Paralog 47/64 2/138
49 triCas2-44 mir-133 tca-miR-133 22/22 ChLG5 - 49-70 N/A 0.995962 Paralog 47/64 2/138
50 triCas2-44 mir-133 mmu-miR-133a 22/22 ChLG5 - 49-70 N/A 0.996067 Paralog 47/64 2/138
51 triCas2-44 mir-133 bfl-miR-133 21/22 ChLG5 - 50-70 N/A 0.99155 Paralog 47/64 2/138
52 triCas2-44 mir-133 cin-miR-133 21/21 ChLG5 - 50-70 N/A 0.991871 Paralog 47/64 2/138
53 triCas2-44 mir-133 ppy-miR-133a 19/21 ChLG5 - 51-69 N/A 0.98776 Paralog 47/64 2/138
54 triCas2-44 mir-133 sme-miR-133 18/20 ChLG5 - 51-69 N/A 0.989738 Paralog 47/64 2/138
55 triCas2-48 mir-1 cel-miR-1 19/21 ChLG5 - 51-69 N/A 0.997953 Paralog 41/61 2/166
56 triCas2-59 let-7 spu-let-7 20/22 ChLG6 + 7-27 N/A 0.996635 Paralog 44/65 2/337
57 triCas2-58 mir-100 mdo-miR-100 21/21 ChLG6 + 17-37 N/A 0.999882 Paralog 39/56 2/88
58 triCas2-58 mir-100 cap-miR-100 20/22 ChLG6 + 17-38 N/A 0.999792 Paralog 39/56 2/88
59 triCas2-58 mir-100 nve-miR-100 21/22 ChLG6 + 18-38 N/A 0.99957 Paralog 39/56 2/88
60 triCas2-56 mir-87 tca-miR-87 20/21 ChLG6 + 50-70 N/A 0.998136 Paralog 21/27 3/39
61 triCas2-54 mir-87 aga-miR-87 19/21 ChLG6 + 50-70 N/A 0.999584 Paralog 21/27 3/39
62 triCas2-54 mir-87 tca-miR-87 21/21 ChLG6 + 51-71 N/A 0.999584 Paralog 21/27 3/39
63 triCas2-59 let-7 hsa-let-7a-2* 20/22 ChLG6 + 51-72 N/A 0.979968 Paralog 44/65 2/337
64 triCas2-56 mir-87 bmo-miR-87 19/21 ChLG6 + 51-71 N/A 0.999451 Paralog 21/27 3/39
65 triCas2-54 mir-87 bmo-miR-87 20/21 ChLG6 + 51-71 N/A 0.999844 Paralog 21/27 3/39
66 triCas2-56 mir-87 aga-miR-87 20/21 ChLG6 + 51-71 N/A 0.997943 Paralog 21/27 3/39
67 triCas2-54 mir-87 cbr-miR-87 20/20 ChLG6 + 51-70 N/A 0.999785 Paralog 21/27 3/39
68 triCas2-54 mir-87 sme-miR-87a 18/20 ChLG6 + 52-70 N/A 0.999887 Paralog 21/27 3/39
69 triCas2-56 mir-87 cbr-miR-87 19/20 ChLG6 + 52-71 N/A 0.998819 Paralog 21/27 3/39
70 triCas2-54 mir-87 dme-miR-87 19/21 ChLG6 + 52-71 N/A 0.999785 Paralog 21/27 3/39
71 triCas2-60 mir-125 bfl-miR-125b-as 22/22 ChLG6 - 49-70 N/A 0.993035 Paralog 45/62 2/195
72 triCas2-62 mir-7 tca-miR-7 23/23 ChLG7 + 13-35 N/A 0.984885 Paralog 46/63 2/143
73 triCas2-62 mir-7 cap-miR-7 23/24 ChLG7 + 13-36 N/A 0.986437 Paralog 46/63 2/143
74 triCas2-65 mir-282 tca-miR-282 24/24 ChLG7 + 15-38 N/A 0.99642 Paralog 16/16 2/28
75 triCas2-63 mir-137 mmu-miR-137 21/23 ChLG7 + 50-72 N/A 0.999875 Paralog 24/47 2/69
76 triCas2-61 mir-92 mmu-miR-92a 19/21 ChLG7 + 50-70 N/A 0.841762 Paralog 47/65 4/170
77 triCas2-63 mir-137 tca-miR-137 22/22 ChLG7 + 51-72 N/A 0.999935 Paralog 24/47 2/69
78 triCas2-63 mir-137 cfa-miR-137 19/21 ChLG7 + 51-71 N/A 0.999918 Paralog 24/47 2/69
79 triCas2-63 mir-137 dme-miR-137 22/22 ChLG7 + 51-72 N/A 0.999856 Paralog 24/47 2/69
80 triCas2-63 mir-137 lgi-miR-137 21/22 ChLG7 + 51-71 N/A 0.999901 Paralog 24/47 2/69
81 triCas2-61 mir-92 tca-miR-92a 18/20 ChLG7 + 51-69 N/A 0.803247 Paralog 47/65 4/170
82 triCas2-63 mir-137 bfl-miR-137 20/22 ChLG7 + 52-71 N/A 0.999919 Paralog 24/47 2/69
83 triCas2-66 mir-190 lgi-miR-190 21/22 ChLG7 - 14-35 N/A 0.989442 Paralog 24/55 2/95
84 triCas2-66 mir-190 bmo-miR-190 23/23 ChLG7 - 14-36 N/A 0.988676 Paralog 24/55 2/95
85 triCas2-75 mir-34 aga-miR-34 20/20 ChLG7 - 15-34 N/A 0.988526 Paralog 45/67 2/144
86 triCas2-66 mir-190 tca-miR-190 25/25 ChLG7 - 15-39 N/A 0.988077 Paralog 24/55 2/95
87 triCas2-66 mir-190 dme-miR-190 24/24 ChLG7 - 15-38 N/A 0.988058 Paralog 24/55 2/95
88 triCas2-75 mir-34 dme-miR-34 24/24 ChLG7 - 16-39 N/A 0.986068 Paralog 45/67 2/144
89 triCas2-75 mir-34 ame-miR-34 21/22 ChLG7 - 16-37 N/A 0.985437 Paralog 45/67 2/144
90 triCas2-75 mir-34 lgi-miR-34 22/23 ChLG7 - 16-38 N/A 0.992098 Paralog 45/67 2/144
91 triCas2-75 mir-34 spu-miR-34 20/22 ChLG7 - 17-37 N/A 0.980036 Paralog 45/67 2/144
92 triCas2-68 mir-281 tca-miR-281* 22/22 ChLG7 - 19-40 N/A 0.998108 Paralog 25/33 2/68
93 triCas2-68 mir-281 sko-miR-281 20/22 ChLG7 - 48-67 N/A 0.999426 Paralog 25/33 2/68
94 triCas2-72 mir-184 bmo-miR-184 24/24 ChLG7 - 48-71 N/A 0.984996 Paralog 40/54 2/73
95 triCas2-68 mir-281 lmi-miR-281 22/23 ChLG7 - 48-69 N/A 0.999734 Paralog 25/33 2/68
96 triCas2-78 mir-317 aga-miR-317 24/25 ChLG7 - 48-72 N/A 0.999423 Paralog 18/19 2/32
97 triCas2-68 mir-281 aga-miR-281 22/23 ChLG7 - 48-70 N/A 0.999735 Paralog 25/33 2/68
98 triCas2-68 mir-281 bfl-miR-281 21/22 ChLG7 - 48-68 N/A 0.999489 Paralog 25/33 2/68
99 triCas2-68 mir-281 bmo-miR-281 22/22 ChLG7 - 49-70 N/A 0.999356 Paralog 25/33 2/68
100 triCas2-72 mir-184 tca-miR-184 22/22 ChLG7 - 49-70 N/A 0.993267 Paralog 40/54 2/73
101 triCas2-78 mir-317 bmo-miR-317 22/22 ChLG7 - 49-70 N/A 0.999042 Paralog 18/19 2/32
102 triCas2-77 mir-277 dsi-miR-277 21/23 ChLG7 - 49-71 N/A 0.98813 Paralog 17/17 2/32
103 triCas2-72 mir-184 oan-miR-184 20/22 ChLG7 - 50-70 N/A 0.994935 Paralog 40/54 2/73
104 triCas2-72 mir-184 xtr-miR-184 20/22 ChLG7 - 50-69 N/A 0.996782 Paralog 40/54 2/73
105 triCas2-84 mir-307 lmi-miR-307* 23/23 ChLG8 + 15-37 N/A 0.998957 Paralog 16/17 2/26
106 triCas2-83 mir-210 lmi-miR-210 21/23 ChLG8 + 22-44 N/A 0.966842 Paralog 33/43 2/62
107 triCas2-83 mir-210 tca-miR-210 19/21 ChLG8 + 23-43 N/A 0.976032 Paralog 33/43 2/62
108 triCas2-84 mir-307 lmi-miR-307 23/23 ChLG8 + 50-72 N/A 0.998125 Paralog 16/17 2/26
109 triCas2-80 mir-92 sko-miR-92a 20/22 ChLG8 + 51-71 N/A 0.98061 Paralog 47/65 4/170
110 triCas2-80 mir-92 ame-miR-92a 20/21 ChLG8 + 51-71 N/A 0.973935 Paralog 47/65 4/170
111 triCas2-80 mir-92 aga-miR-92a 21/22 ChLG8 + 51-72 N/A 0.987944 Paralog 47/65 4/170
112 triCas2-80 mir-92 tca-miR-92a 20/20 ChLG8 + 52-71 N/A 0.965356 Paralog 47/65 4/170
113 triCas2-80 mir-92 mmu-miR-92a 19/21 ChLG8 + 52-71 N/A 0.971632 Paralog 47/65 4/170
114 triCas2-84 mir-307 tca-miR-307 20/20 ChLG8 + 52-71 N/A 0.999271 Paralog 16/17 2/26
115 triCas2-88 mir-927 tca-miR-927 22/22 ChLG9 + 14-35 N/A 0.999092 Paralog 5/14 2/16
116 triCas2-90 mir-8 lmi-miR-8* 22/22 ChLG9 - 14-35 N/A 0.855227 Paralog 20/23 2/35
117 triCas2-89 mir-9 xtr-miR-9 20/22 ChLG9 - 15-36 N/A 0.967456 Paralog 41/59 5/206
118 triCas2-89 mir-9 tca-miR-9a 21/23 ChLG9 - 15-37 N/A 0.977931 Paralog 41/59 5/206
119 triCas2-92 mir-305 tca-miR-305 23/23 ChLG9 - 15-37 N/A 0.999704 Paralog 16/19 2/23
120 triCas2-93 mir-275 tca-miR-275 23/23 ChLG9 - 49-71 N/A 0.984066 Paralog 16/16 2/25
121 triCas2-90 mir-8 lmi-miR-8 22/23 ChLG9 - 49-71 N/A 0.981159 Paralog 20/23 2/35
122 triCas2-95 mir-9 lmi-miR-9a* 22/23 chrUn_11 + 50-72 N/A 0.940548 Paralog 41/59 5/206
123 triCas2-97 mir-929 tca-miR-929 21/21 chrUn_44 - 19-39 N/A 0.999942 Paralog 5/17 2/21
124 triCas2-98 mir-9 tca-miR-9b 23/23 chrUn_91 + 13-35 N/A 0.960856 Paralog 41/59 5/206
Total 124 record(s).